Went to Mazda to pick up my car.
I went for a new O2 sensor and to get the issue popping out of 2nd gear looked at.
New O2 sensor (wideband) installed, new motor mount installed (they figured thats why I was popping out of gear) and 3 TSB's taken care of.
Total cost $809.
Tranny issue still occuring. Looks like Mazda will be rebuilding my tranny.
I ordered an ACT street clutch and Mazda said they will install it for free when they are working on my transmission. W00t!
I also appreciate my dealer not caring about my TBE, Forge BPV or my Cobb SRI.