Update:
I found that the microtech starts to do really weird s*** when the voltage gets close to 12V. And when under (even including drops under cranking) it wont work at all. When I have the charger on the battery the microtech acts fine. So no problems I can tell with the Microtech (I get gas, spark, no error lights)
Orion you helped me pick out the new spot for the second water temp sensor. So yeah I have a 93 small block chevy water temp sensor running the microtech. However I might trade them and have the microtech run off of the stock and have the stock ecu use the chevy one. I will do this to try to get the temp readings closer to what they really are. And yes I have tried a couple of different wt sensors to make sure they are not bad.
I fortunately have the same car as a daily driver. So did a test. I unplugged the three sensors that I cut out from the race car, and started it at 10*F...... no problems at all. It started right up like always.
I have also put in NSN's tune on slot three and tried that to no avail. However I will be at a car show in February. I am hoping that they keep the building warm. If so and it starts then I know what to do. If it does not start I might have to start all over with a new ecu system. But months from now when its not cold as **** out. Speaking of which.... why arent you ausi guys not posting up????
A small motorcycle battery.
Based on this it sounds like your battery might be insufficient for the task.
I know Install had a similiar issue with cold cranking with his old engine. Cept his was worse from what I can gather. His was due to the weight of the rotating assembly. I think yours stems from the energy require to turn over a cold engine and fire.